TY - GEN
T1 - Attention-Guided Deep Domain Adaptation for Brain Dementia Identification with Multi-site Neuroimaging Data
AU - Guan, Hao
AU - Yang, Erkun
AU - Yap, Pew Thian
AU - Shen, Dinggang
AU - Liu, Mingxia
N1 - Publisher Copyright:
© 2020, Springer Nature Switzerland AG.
PY - 2020
Y1 - 2020
N2 - Deep learning has demonstrated its superiority in automated identification of brain dementia based on neuroimaging data, such as structural MRIs. Previous methods typically assume that multi-site data are sampled from the same distribution. Such an assumption may not hold in practice due to the data heterogeneity caused by different scanning parameters and subject populations in multiple imaging sites. Even though several deep domain adaptation methods have been proposed to mitigate data heterogeneity between sites, they usually require a portion of labeled target data for model training, and rarely consider the potentially different contributions of different brain regions to disease prognosis. To address these limitations, we propose an attention-guided deep domain adaptation (ADA) framework for brain dementia prognosis, which does not need label information of the target domain and can automatically identify discriminative locations in whole-brain MR images. The proposed ADA framework consists of three key components: 1) a feature encoding module for representation learning of input MR images, 2) an attention discovery module for automatically locating dementia-related discriminative regions in brain MRIs, and 3) a domain transfer module with adversarial learning for knowledge transfer between the source and target domains. Extensive experiments have been conducted on three benchmark neuroimaging datasets, with results suggesting the effectiveness of our method in both tasks of brain dementia identification and disease progression prediction.
AB - Deep learning has demonstrated its superiority in automated identification of brain dementia based on neuroimaging data, such as structural MRIs. Previous methods typically assume that multi-site data are sampled from the same distribution. Such an assumption may not hold in practice due to the data heterogeneity caused by different scanning parameters and subject populations in multiple imaging sites. Even though several deep domain adaptation methods have been proposed to mitigate data heterogeneity between sites, they usually require a portion of labeled target data for model training, and rarely consider the potentially different contributions of different brain regions to disease prognosis. To address these limitations, we propose an attention-guided deep domain adaptation (ADA) framework for brain dementia prognosis, which does not need label information of the target domain and can automatically identify discriminative locations in whole-brain MR images. The proposed ADA framework consists of three key components: 1) a feature encoding module for representation learning of input MR images, 2) an attention discovery module for automatically locating dementia-related discriminative regions in brain MRIs, and 3) a domain transfer module with adversarial learning for knowledge transfer between the source and target domains. Extensive experiments have been conducted on three benchmark neuroimaging datasets, with results suggesting the effectiveness of our method in both tasks of brain dementia identification and disease progression prediction.
UR - http://www.scopus.com/inward/record.url?scp=85092204513&partnerID=8YFLogxK
U2 - 10.1007/978-3-030-60548-3_4
DO - 10.1007/978-3-030-60548-3_4
M3 - Conference contribution
AN - SCOPUS:85092204513
SN - 9783030605476
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 31
EP - 40
BT - Domain Adaptation and Representation Transfer, and Distributed and Collaborative Learning - 2nd MICCAI Workshop, DART 2020, and 1st MICCAI Workshop, DCL 2020, Held in Conjunction with MICCAI 2020, Proceedings
A2 - Albarqouni, Shadi
A2 - Bakas, Spyridon
A2 - Kamnitsas, Konstantinos
A2 - Cardoso, M. Jorge
A2 - Landman, Bennett
A2 - Li, Wenqi
A2 - Milletari, Fausto
A2 - Rieke, Nicola
A2 - Roth, Holger
A2 - Xu, Daguang
A2 - Xu, Ziyue
PB - Springer Science and Business Media Deutschland GmbH
T2 - 2nd MICCAI Workshop on Domain Adaptation and Representation Transfer, DART 2020, and the 1st MICCAI Workshop on Distributed and Collaborative Learning, DCL 2020, held in conjunction with the Medical Image Computing and Computer Assisted Intervention, MICCAI 2020
Y2 - 4 October 2020 through 8 October 2020
ER -