Chemical induction of the interaction between AIMP2-DX2 and Siah1 to enhance ubiquitination

  • Dae Gyu Kim
  • , Minkyoung Kim
  • , Ja il Goo
  • , Jiwon Kong
  • , Dipesh S. Harmalkar
  • , Qili Lu
  • , Aneesh Sivaraman
  • , Hossam Nada
  • , Sreenivasulu Godesi
  • , Hwayoung Lee
  • , Mo Eun Song
  • , Eunjoo Song
  • , Kang Hyun Han
  • , Woojin Kim
  • , Pilhan Kim
  • , Won Jun Choi
  • , Chang Hoon Lee
  • , Sunkyung Lee
  • , Yongseok Choi
  • , Sunghoon Kim*
  • Kyeong Lee*
*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

1 Citation (Scopus)

Abstract

AIMP2-DX2 (hereafter DX2) is an oncogenic variant of aminoacyl-tRNA synthetase-interacting multifunctional protein 2 (AIMP2) that mediates tumorigenic interactions with various factors involved in cancer. Reducing the levels of DX2 can effectively inhibit tumorigenesis. We previously reported that DX2 can be degraded through Siah1-mediated ubiquitination. In this study, we identified a compound, SDL01, which enhanced the interaction between DX2 and Siah1, thereby facilitating the ubiquitin-dependent degradation of DX2. SDL01 was found to bind to the pocket surrounding the N-terminal flexible region and GST domain of DX2, causing a conformational change that stabilized its interaction with Siah1. Our findings demonstrate that protein-protein interactions (PPIs) can be modulated through chemically induced conformational changes.

Original languageEnglish
Pages (from-to)1958-1968.e8
JournalCell Chemical Biology
Volume31
Issue number11
DOIs
Publication statusPublished - 2024 Nov 21

Bibliographical note

Publisher Copyright:
© 2024 Elsevier Ltd

Keywords

  • AIMP2-DX2
  • Siah1
  • allosteric modulation
  • and molecular docking
  • small molecule
  • ubiquitination

ASJC Scopus subject areas

  • Biochemistry
  • Molecular Medicine
  • Molecular Biology
  • Pharmacology
  • Drug Discovery
  • Clinical Biochemistry

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