TY - GEN
T1 - Deep granular feature-label distribution learning for neuroimaging-based infant age prediction
AU - for UNC/UMN Baby Connectome Project Consortium
AU - Hu, Dan
AU - Zhang, Han
AU - Wu, Zhengwang
AU - Lin, Weili
AU - Li, Gang
AU - Shen, Dinggang
N1 - Funding Information:
Acknowledgments. This work was partially supported by NIH grants (MH107815, MH116225, and MH117943). This work also utilizes approaches developed by an NIH grant (1U01MH110274) and the efforts of the UNC/UMN Baby Connectome Project Consortium.
Publisher Copyright:
© Springer Nature Switzerland AG 2019.
PY - 2019
Y1 - 2019
N2 - Neuroimaging-based infant age prediction is important for brain development analysis but often suffers insufficient data. To address this challenge, we introduce label distribution learning (LDL), a popular machine learning paradigm focusing on the small sample problem, for infant age prediction. As directly applying LDL yields dramatically increased number of day-to-day age labels and also extremely scarce data describing each label, we propose a new strategy, called granular label distribution (GLD). Particularly, by assembling the adjacent labels to granules and designing granular distributions, GLD makes each brain MRI contribute to not only its own age but also its neighboring ages at a granule scale, which effectively keeps the information augmentation superiority of LDL and reduces the number of labels. Furthermore, to extremely augment the information supplied by the small data, we propose a novel method named granular feature distribution (GFD). GFD leverages the variability of the brain images at the same age, thus significantly increases the learning effectiveness. Moreover, deep neural network is exploited to approximate the GLD. These strategies constitute a new model: deep granular feature-label distribution learning (DGFLDL). By taking 8 types of cortical morphometric features from structural MRI as predictors, the proposed DGFLDL is validated on infant age prediction using 384 brain MRI scans from 35 to 848 days after birth. Our proposed method, approaching the mean absolute error as 36.1 days, significantly outperforms the baseline methods. Besides, the permutation importance analysis of features based on our method reveals important biomarkers of infant brain development.
AB - Neuroimaging-based infant age prediction is important for brain development analysis but often suffers insufficient data. To address this challenge, we introduce label distribution learning (LDL), a popular machine learning paradigm focusing on the small sample problem, for infant age prediction. As directly applying LDL yields dramatically increased number of day-to-day age labels and also extremely scarce data describing each label, we propose a new strategy, called granular label distribution (GLD). Particularly, by assembling the adjacent labels to granules and designing granular distributions, GLD makes each brain MRI contribute to not only its own age but also its neighboring ages at a granule scale, which effectively keeps the information augmentation superiority of LDL and reduces the number of labels. Furthermore, to extremely augment the information supplied by the small data, we propose a novel method named granular feature distribution (GFD). GFD leverages the variability of the brain images at the same age, thus significantly increases the learning effectiveness. Moreover, deep neural network is exploited to approximate the GLD. These strategies constitute a new model: deep granular feature-label distribution learning (DGFLDL). By taking 8 types of cortical morphometric features from structural MRI as predictors, the proposed DGFLDL is validated on infant age prediction using 384 brain MRI scans from 35 to 848 days after birth. Our proposed method, approaching the mean absolute error as 36.1 days, significantly outperforms the baseline methods. Besides, the permutation importance analysis of features based on our method reveals important biomarkers of infant brain development.
KW - Cortical features
KW - Infant age prediction
KW - Label distribution learning
UR - http://www.scopus.com/inward/record.url?scp=85075699379&partnerID=8YFLogxK
U2 - 10.1007/978-3-030-32251-9_17
DO - 10.1007/978-3-030-32251-9_17
M3 - Conference contribution
AN - SCOPUS:85075699379
SN - 9783030322502
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 149
EP - 157
BT - Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings
A2 - Shen, Dinggang
A2 - Yap, Pew-Thian
A2 - Liu, Tianming
A2 - Peters, Terry M.
A2 - Khan, Ali
A2 - Staib, Lawrence H.
A2 - Essert, Caroline
A2 - Zhou, Sean
PB - Springer Science and Business Media Deutschland GmbH
T2 - 22nd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2019
Y2 - 13 October 2019 through 17 October 2019
ER -