TY - JOUR
T1 - Fetal cortical surface atlas parcellation based on growth patterns
AU - Xia, Jing
AU - Wang, Fan
AU - Benkarim, Oualid M.
AU - Sanroma, Gerard
AU - Piella, Gemma
AU - González Ballester, Miguel A.
AU - Hahner, Nadine
AU - Eixarch, Elisenda
AU - Zhang, Caiming
AU - Shen, Dinggang
AU - Li, Gang
N1 - Funding Information:
This work was partially supported by NIH grants (MH107815 to G.L., MH108914 to G.L., MH116225 to G.L., and MH117943 to G.L. and D.S.). This study was also partially supported by Instituto de Salud Carlos III (PI16/00861 and INT16/00168) integrados en el Plan Nacional de I+D+I y Cofinanciados por el ISCIII-Subdirección General de Evaluación y el Fondo Europeo de Desarrollo Regional (FEDER) “Una manera de hacer Europa”, CERCA Programme/Generalitat de Catalunya, “la Caixa” Foundation, and The Cerebra Foundation for the Brain-Injured Child, Carmarthen, Wales.
Funding Information:
information Instituto de Salud Carlos III, Grant/Award Numbers: PI16/00861, INT16/00168; National Institutes of Health (NIH), Grant/Award Numbers: MH107815, MH108914, MH116225, MH117943; Cerebra Foundation for the Brain Injured Child (Carmarthen, Wales, UK); ?la Caixa? Foundation; CERCA Programme from Generalitat de CatalunyaThis work was partially supported by NIH grants (MH107815 to G.L., MH108914 to G.L., MH116225 to G.L., and MH117943 to G.L. and D.S.). This study was also partially supported by Instituto de Salud Carlos III (PI16/00861 and INT16/00168) integrados en el Plan Nacional de I+D+I y Cofinanciados por el ISCIII-Subdirecci?n General de Evaluaci?n y el Fondo Europeo de Desarrollo Regional (FEDER) ?Una manera de hacer Europa?, CERCA Programme/Generalitat de Catalunya, ?la Caixa? Foundation, and The Cerebra Foundation for the Brain-Injured Child, Carmarthen, Wales.
Funding Information:
Instituto de Salud Carlos III, Grant/Award Numbers: PI16/00861, INT16/00168; National Institutes of Health (NIH), Grant/ Award Numbers: MH107815, MH108914, MH116225, MH117943; Cerebra Foundation for the Brain Injured Child (Carmarthen, Wales, UK); “la Caixa” Foundation; CERCA Programme from Generalitat de Catalunya
Publisher Copyright:
© 2019 Wiley Periodicals, Inc.
PY - 2019
Y1 - 2019
N2 - Defining anatomically and functionally meaningful parcellation maps on cortical surface atlases is of great importance in surface-based neuroimaging analysis. The conventional cortical parcellation maps are typically defined based on anatomical cortical folding landmarks in adult surface atlases. However, they are not suitable for fetal brain studies, due to dramatic differences in brain size, shape, and properties between adults and fetuses. To address this issue, we propose a novel data-driven method for parcellation of fetal cortical surface atlases into distinct regions based on the dynamic “growth patterns” of cortical properties (e.g., surface area) from a population of fetuses. Our motivation is that the growth patterns of cortical properties indicate the underlying rapid changes of microstructures, which determine the molecular and functional principles of the cortex. Thus, growth patterns are well suitable for defining distinct cortical regions in development, structure, and function. To comprehensively capture the similarities of cortical growth patterns among vertices, we construct two complementary similarity matrices. One is directly based on the growth trajectories of vertices, and the other is based on the correlation profiles of vertices' growth trajectories in relation to a set of reference points. Then, we nonlinearly fuse these two similarity matrices into a single one, which can better capture both their common and complementary information than by simply averaging them. Finally, based on this fused similarity matrix, we perform spectral clustering to divide the fetal cortical surface atlases into distinct regions. By applying our method on 25 normal fetuses from 26 to 29 gestational weeks, we construct age-specific fetal cortical surface atlases equipped with biologically meaningful parcellation maps based on cortical growth patterns. Importantly, our generated parcellation maps reveal spatially contiguous, hierarchical and bilaterally relatively symmetric patterns of fetal cortical surface development.
AB - Defining anatomically and functionally meaningful parcellation maps on cortical surface atlases is of great importance in surface-based neuroimaging analysis. The conventional cortical parcellation maps are typically defined based on anatomical cortical folding landmarks in adult surface atlases. However, they are not suitable for fetal brain studies, due to dramatic differences in brain size, shape, and properties between adults and fetuses. To address this issue, we propose a novel data-driven method for parcellation of fetal cortical surface atlases into distinct regions based on the dynamic “growth patterns” of cortical properties (e.g., surface area) from a population of fetuses. Our motivation is that the growth patterns of cortical properties indicate the underlying rapid changes of microstructures, which determine the molecular and functional principles of the cortex. Thus, growth patterns are well suitable for defining distinct cortical regions in development, structure, and function. To comprehensively capture the similarities of cortical growth patterns among vertices, we construct two complementary similarity matrices. One is directly based on the growth trajectories of vertices, and the other is based on the correlation profiles of vertices' growth trajectories in relation to a set of reference points. Then, we nonlinearly fuse these two similarity matrices into a single one, which can better capture both their common and complementary information than by simply averaging them. Finally, based on this fused similarity matrix, we perform spectral clustering to divide the fetal cortical surface atlases into distinct regions. By applying our method on 25 normal fetuses from 26 to 29 gestational weeks, we construct age-specific fetal cortical surface atlases equipped with biologically meaningful parcellation maps based on cortical growth patterns. Importantly, our generated parcellation maps reveal spatially contiguous, hierarchical and bilaterally relatively symmetric patterns of fetal cortical surface development.
KW - fetal cortical atlas
KW - growth pattern
KW - parcellation
UR - http://www.scopus.com/inward/record.url?scp=85066104527&partnerID=8YFLogxK
U2 - 10.1002/hbm.24637
DO - 10.1002/hbm.24637
M3 - Article
C2 - 31106942
AN - SCOPUS:85066104527
SN - 1065-9471
VL - 40
SP - 3881
EP - 3899
JO - Human Brain Mapping
JF - Human Brain Mapping
IS - 13
ER -