Flavobacterium magnum sp. nov., flavobacterium pallidum sp. nov., flavobacterium crocinum sp. nov. and flavobacterium album sp. nov

Chaeyun Baek; Su Kyoung Shin; Hana Yi

doi:10.1099/ijsem.0.003067

Flavobacterium magnum sp. nov., flavobacterium pallidum sp. nov., flavobacterium crocinum sp. nov. and flavobacterium album sp. nov

Chaeyun Baek, Su Kyoung Shin, Hana Yi

School of Biosystem and Biomedical Science

Research output: Contribution to journal › Article › peer-review

5 Citations (Scopus)

Abstract

Four new limnic bacterial strains, namely HYN0048 ^T , HYN0049 ^T , HYN0056 ^T and HYN0059 ^T , were isolated from two lakes in the Nakdong River water system in Korea. 16S rRNA gene sequence analyses indicated that strains HYN0048 ^T , HYN0049 ^T , HYN0056 ^T and HYN0059 ^T belonged to the genus Flavobacterium by showing the highest sequence similarities with the type strains of F. soli (94.9 %), F. keumense (95.1 %), F. dispersum (97.7 %) and F. hauense (97.6 %), respectively. The low sequence similarities and tree topologies implied the novelty of the four isolates, as novel genomic species of the genus Flavobacterium. Numerous physiological and biochemical features also supported the distinctiveness of the isolates from previously known bacterial species. On the basis of the phylogenetic and phenotypic data presented in this study, four novel species are suggested with the following names: Flavobacterium magnum sp. nov. (type strain HYN0048 ^T =KACC 19180 ^T =NBRC 112740 ^T ), Flavobacterium pallidum sp. nov. (HYN0049 ^T =KACC 19181 ^T =NBRC 112741 ^T ), Flavobacterium crocinum sp. nov. (HYN0056 ^T =KACC 19182 ^T =NBRC 112743 ^T ) and Flavobacterium album sp. nov. (HYN0059 ^T =KACC 19183 ^T =NBRC 112744 ^T ).

Original language	English
Article number	003067
Pages (from-to)	3837-3843
Number of pages	7
Journal	International Journal of Systematic and Evolutionary Microbiology
Volume	68
Issue number	12
DOIs	https://doi.org/10.1099/ijsem.0.003067
Publication status	Published - 2018 Dec

Bibliographical note

Funding Information:
This study was supported by the research grant ‘Survey of Freshwater Organisms and Specimen Collection (Prokaryotes)’ from the Nak-donggang National Institute of Biological Resources of the Ministry of Environment in Korea, by the Basic Science Research Programs through the National Research Foundation of Korea (NRF), funded by the Korean Ministry of Education (2015R1D1A1A01057527), and by the Strategic Initiative for Microbiomes in Agriculture and Food, funded by the Ministry of Agriculture, Food and Rural Affairs (918010-4).

Funding Information:
This study was supported by the research grant ‘Survey of Freshwater Organisms and Specimen Collection (Prokaryotes)' from the Nakdonggang National Institute of Biological Resources of the Ministry of Environment in Korea, by the Basic Science Research Programs through the National Research Foundation of Korea (NRF), funded by the Korean Ministry of Education (2015R1D1A1A01057527), and by the Strategic Initiative for Microbiomes in Agriculture and Food, funded by the Ministry of Agriculture, Food and Rural Affairs (918010-4).

Publisher Copyright:
© 2018 IUMS.

Keywords

Flavobacterium
Lake water

ASJC Scopus subject areas

Microbiology
Ecology, Evolution, Behavior and Systematics

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10.1099/ijsem.0.003067

Cite this

@article{d28ef57e97e74f13bc7a33adbd8a4808,

title = "Flavobacterium magnum sp. nov., flavobacterium pallidum sp. nov., flavobacterium crocinum sp. nov. and flavobacterium album sp. nov",

abstract = " Four new limnic bacterial strains, namely HYN0048 T , HYN0049 T , HYN0056 T and HYN0059 T , were isolated from two lakes in the Nakdong River water system in Korea. 16S rRNA gene sequence analyses indicated that strains HYN0048 T , HYN0049 T , HYN0056 T and HYN0059 T belonged to the genus Flavobacterium by showing the highest sequence similarities with the type strains of F. soli (94.9 %), F. keumense (95.1 %), F. dispersum (97.7 %) and F. hauense (97.6 %), respectively. The low sequence similarities and tree topologies implied the novelty of the four isolates, as novel genomic species of the genus Flavobacterium. Numerous physiological and biochemical features also supported the distinctiveness of the isolates from previously known bacterial species. On the basis of the phylogenetic and phenotypic data presented in this study, four novel species are suggested with the following names: Flavobacterium magnum sp. nov. (type strain HYN0048 T =KACC 19180 T =NBRC 112740 T ), Flavobacterium pallidum sp. nov. (HYN0049 T =KACC 19181 T =NBRC 112741 T ), Flavobacterium crocinum sp. nov. (HYN0056 T =KACC 19182 T =NBRC 112743 T ) and Flavobacterium album sp. nov. (HYN0059 T =KACC 19183 T =NBRC 112744 T ). ",

keywords = "Flavobacterium, Lake water",

author = "Chaeyun Baek and Shin, {Su Kyoung} and Hana Yi",

note = "Funding Information: This study was supported by the research grant {\textquoteleft}Survey of Freshwater Organisms and Specimen Collection (Prokaryotes){\textquoteright} from the Nak-donggang National Institute of Biological Resources of the Ministry of Environment in Korea, by the Basic Science Research Programs through the National Research Foundation of Korea (NRF), funded by the Korean Ministry of Education (2015R1D1A1A01057527), and by the Strategic Initiative for Microbiomes in Agriculture and Food, funded by the Ministry of Agriculture, Food and Rural Affairs (918010-4). Funding Information: This study was supported by the research grant {\textquoteleft}Survey of Freshwater Organisms and Specimen Collection (Prokaryotes)' from the Nakdonggang National Institute of Biological Resources of the Ministry of Environment in Korea, by the Basic Science Research Programs through the National Research Foundation of Korea (NRF), funded by the Korean Ministry of Education (2015R1D1A1A01057527), and by the Strategic Initiative for Microbiomes in Agriculture and Food, funded by the Ministry of Agriculture, Food and Rural Affairs (918010-4). Publisher Copyright: {\textcopyright} 2018 IUMS.",

year = "2018",

month = dec,

doi = "10.1099/ijsem.0.003067",

language = "English",

volume = "68",

pages = "3837--3843",

journal = "International Journal of Systematic and Evolutionary Microbiology",

issn = "1466-5026",

publisher = "Microbiology Society",

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TY - JOUR

T1 - Flavobacterium magnum sp. nov., flavobacterium pallidum sp. nov., flavobacterium crocinum sp. nov. and flavobacterium album sp. nov

AU - Baek, Chaeyun

AU - Shin, Su Kyoung

AU - Yi, Hana

N1 - Funding Information: This study was supported by the research grant ‘Survey of Freshwater Organisms and Specimen Collection (Prokaryotes)’ from the Nak-donggang National Institute of Biological Resources of the Ministry of Environment in Korea, by the Basic Science Research Programs through the National Research Foundation of Korea (NRF), funded by the Korean Ministry of Education (2015R1D1A1A01057527), and by the Strategic Initiative for Microbiomes in Agriculture and Food, funded by the Ministry of Agriculture, Food and Rural Affairs (918010-4). Funding Information: This study was supported by the research grant ‘Survey of Freshwater Organisms and Specimen Collection (Prokaryotes)' from the Nakdonggang National Institute of Biological Resources of the Ministry of Environment in Korea, by the Basic Science Research Programs through the National Research Foundation of Korea (NRF), funded by the Korean Ministry of Education (2015R1D1A1A01057527), and by the Strategic Initiative for Microbiomes in Agriculture and Food, funded by the Ministry of Agriculture, Food and Rural Affairs (918010-4). Publisher Copyright: © 2018 IUMS.

PY - 2018/12

Y1 - 2018/12

N2 - Four new limnic bacterial strains, namely HYN0048 T , HYN0049 T , HYN0056 T and HYN0059 T , were isolated from two lakes in the Nakdong River water system in Korea. 16S rRNA gene sequence analyses indicated that strains HYN0048 T , HYN0049 T , HYN0056 T and HYN0059 T belonged to the genus Flavobacterium by showing the highest sequence similarities with the type strains of F. soli (94.9 %), F. keumense (95.1 %), F. dispersum (97.7 %) and F. hauense (97.6 %), respectively. The low sequence similarities and tree topologies implied the novelty of the four isolates, as novel genomic species of the genus Flavobacterium. Numerous physiological and biochemical features also supported the distinctiveness of the isolates from previously known bacterial species. On the basis of the phylogenetic and phenotypic data presented in this study, four novel species are suggested with the following names: Flavobacterium magnum sp. nov. (type strain HYN0048 T =KACC 19180 T =NBRC 112740 T ), Flavobacterium pallidum sp. nov. (HYN0049 T =KACC 19181 T =NBRC 112741 T ), Flavobacterium crocinum sp. nov. (HYN0056 T =KACC 19182 T =NBRC 112743 T ) and Flavobacterium album sp. nov. (HYN0059 T =KACC 19183 T =NBRC 112744 T ).

AB - Four new limnic bacterial strains, namely HYN0048 T , HYN0049 T , HYN0056 T and HYN0059 T , were isolated from two lakes in the Nakdong River water system in Korea. 16S rRNA gene sequence analyses indicated that strains HYN0048 T , HYN0049 T , HYN0056 T and HYN0059 T belonged to the genus Flavobacterium by showing the highest sequence similarities with the type strains of F. soli (94.9 %), F. keumense (95.1 %), F. dispersum (97.7 %) and F. hauense (97.6 %), respectively. The low sequence similarities and tree topologies implied the novelty of the four isolates, as novel genomic species of the genus Flavobacterium. Numerous physiological and biochemical features also supported the distinctiveness of the isolates from previously known bacterial species. On the basis of the phylogenetic and phenotypic data presented in this study, four novel species are suggested with the following names: Flavobacterium magnum sp. nov. (type strain HYN0048 T =KACC 19180 T =NBRC 112740 T ), Flavobacterium pallidum sp. nov. (HYN0049 T =KACC 19181 T =NBRC 112741 T ), Flavobacterium crocinum sp. nov. (HYN0056 T =KACC 19182 T =NBRC 112743 T ) and Flavobacterium album sp. nov. (HYN0059 T =KACC 19183 T =NBRC 112744 T ).

KW - Flavobacterium

KW - Lake water

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U2 - 10.1099/ijsem.0.003067

DO - 10.1099/ijsem.0.003067

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AN - SCOPUS:85059796494

SN - 1466-5026

VL - 68

SP - 3837

EP - 3843

JO - International Journal of Systematic and Evolutionary Microbiology

JF - International Journal of Systematic and Evolutionary Microbiology

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ER -

Flavobacterium magnum sp. nov., flavobacterium pallidum sp. nov., flavobacterium crocinum sp. nov. and flavobacterium album sp. nov

Abstract

Bibliographical note

Keywords

ASJC Scopus subject areas

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