Identification of σB-dependent promoters using consensus-directed search of Streptomyces coelicolor genome

Eun Jin Lee; You Hee Cho; Hyo Sub Kim; Jung Hye Roe

Identification of σ^B-dependent promoters using consensus-directed search of Streptomyces coelicolor genome

Eun Jin Lee, You Hee Cho, Hyo Sub Kim, Jung Hye Roe

Research output: Contribution to journal › Article › peer-review

Abstract

σ^B plays an important role in both osmoprotection and proper differentiation in Streptomyces coelicolor A3(2). We searched for candidate members of the σ^B regulon from the genome database, using the consensus promoter sequence (GNNTN_14-16GGGTAC/T). The list consists of 115 genes, and includes all the known σ^B target genes and many other genes whose functions are related to stress protection and differentiation.

Original language	English
Pages (from-to)	147-151
Number of pages	5
Journal	Journal of Microbiology
Volume	42
Issue number	2
Publication status	Published - 2004 Jun
Externally published	Yes

Keywords

Differentiation
Osmotic stress
Sigma B (σ)
Streptomyces coelicolor

ASJC Scopus subject areas

Microbiology
Applied Microbiology and Biotechnology

Cite this

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abstract = "σB plays an important role in both osmoprotection and proper differentiation in Streptomyces coelicolor A3(2). We searched for candidate members of the σB regulon from the genome database, using the consensus promoter sequence (GNNTN14-16GGGTAC/T). The list consists of 115 genes, and includes all the known σB target genes and many other genes whose functions are related to stress protection and differentiation.",

keywords = "Differentiation, Osmotic stress, Sigma B (σ), Streptomyces coelicolor",

author = "Lee, {Eun Jin} and Cho, {You Hee} and Kim, {Hyo Sub} and Roe, {Jung Hye}",

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AU - Roe, Jung Hye

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AB - σB plays an important role in both osmoprotection and proper differentiation in Streptomyces coelicolor A3(2). We searched for candidate members of the σB regulon from the genome database, using the consensus promoter sequence (GNNTN14-16GGGTAC/T). The list consists of 115 genes, and includes all the known σB target genes and many other genes whose functions are related to stress protection and differentiation.

KW - Differentiation

KW - Osmotic stress

KW - Sigma B (σ)

KW - Streptomyces coelicolor

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Identification of σ^B-dependent promoters using consensus-directed search of Streptomyces coelicolor genome

Abstract

Keywords

ASJC Scopus subject areas

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