Jannaschia ovalis sp. nov., a marine bacterium isolated from a tidal flat sediment in the Republic of Korea

Dae Young Kwon, Sang Hyun Lee, Jong Seong Khim, Xiaoyue Xu, Bogun Kim, In Geol Choi, Yeonjae Yoo, Jae Jin Kim

Research output: Contribution to journalArticlepeer-review

Abstract

A Gram-stain-negative, non-motile, aerobic, pale-yellow coloured and oval-shaped bacterium designated GRR-S6-38T was isolated from a tidal flat sediment that collected from Garorim Bay of the Yellow Sea, Republic of Korea. Strain GRR-S6-38T grew at 15–40 °C (optimum, 30 °C) at pH 6–9 (optimum, pH 7) and at 2–6% (w/v) NaCl (optimum, 2% NaCl). Phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain GRR-S6-38T was closely related to those of J. seosinensis CL-SP26T (98.1%), J. helgolandensis DSM 14858T (97.4%), J. rubra CECT 5088T (97.4%), J. faecimaris DSM 100420T (97.4%), J. marina SHC163T (97.3%), J. donghaensis CECT 7802T (97.2%) and J. pohangensis DSM 19073T (97.1%). The average nucleotide identity and digital DNA-DNA hybridization value between GRR-S6-38T and related type strains were 71.47–78.59% and 17.80–21.40%. Strain GRR-S6-38T was characterized as having Q-10 as the predominant respiratory quinone and the major principle fatty acids (> 10%) were SF 8 (C18:1ω7c/C18:1ω6c, 39.3%), C19:0ω8c cyclo (13.2%) and C18:1ω7c 11-methyl (10.6%). The polar lipids consisted of diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol, an unidentified lipid, two unidentified aminolipids and two unidentified phospholipids. The assembled genome of strain GRR-S6-38T has a total length of 3.32 Mbp, and a G + C content is 69.98%. Based on the polyphasic taxonomic evidence presented in this study, GRR-S6-38T is regarded to represent a novel species within the genus Jannaschia, for which name Jannaschia ovalis sp. nov. is proposed. The type strain is GRR-S6-38T (= KCTC 82518 = KACC 22240 = JCM 36187).

Original languageEnglish
Article number36
JournalAntonie van Leeuwenhoek, International Journal of General and Molecular Microbiology
Volume118
Issue number1
DOIs
Publication statusPublished - 2025 Jan

Bibliographical note

Publisher Copyright:
© The Author(s), under exclusive licence to Springer Nature Switzerland AG 2024.

Keywords

  • Jannaschia
  • Marine bacteria
  • Polyphasic taxonomy
  • Tidal flat
  • Yellow sea

ASJC Scopus subject areas

  • Microbiology
  • Molecular Biology

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