TY - JOUR
T1 - Multi-Class ASD Classification Based on Functional Connectivity and Functional Correlation Tensor via Multi-Source Domain Adaptation and Multi-View Sparse Representation
AU - Wang, Jun
AU - Zhang, Lichi
AU - Wang, Qian
AU - Chen, Lei
AU - Shi, Jun
AU - Chen, Xiaobo
AU - Li, Zuoyong
AU - Shen, Dinggang
N1 - Funding Information:
This work was supported in part by the National Natural Science Foundation of China under Grant 61872190, the Natural Science Foundation of Jiangsu Province under Grant BK20181339, the Jiangsu Key Laboratory of Big Data Security and Intelligent Processing (NJUPT) under Grant BDSIP1904, the Key Project of College Youth Natural Science Foundation of Fujian Province under Grant JZ160467, and the Fujian Provincial Key Laboratory of Information Processing and Intelligent Control (Minjiang University) under Grant MJUKF-IPIC201901. This work was also supported in part by the National Key Research and Development Program of China under Grant 2018YFC0116400, STCSM under Grant 19QC1400600 and Grant 17411953300, the Shanghai Pujiang Program under Grant 19PJ1406800, the Interdisciplinary Program of Shanghai Jiao Tong University, and the 111 Project under Grant D20031.
Publisher Copyright:
© 2020 IEEE.
PY - 2020/10
Y1 - 2020/10
N2 - The resting-state functional magnetic resonance imaging (rs-fMRI) reflects functional activity of brain regions by blood-oxygen-level dependent (BOLD) signals. Up to now, many computer-aided diagnosismethods based on rs-fMRI have been developed for Autism Spectrum Disorder (ASD). These methods are mostly the binary classification approaches to determine whether a subject is anASD patient or not. However, the disease often consists of several sub-categories, which are complex and thus still confusing to many automatic classification methods. Besides, existing methods usually focus on the functional connectivity (FC) features in greymatter regions,which only account for a small portion of the rs-fMRI data. Recently, the possibility to reveal the connectivity information in the white matter regions of rs-fMRI has drawn high attention. To this end, we propose to use the patch-based functional correlation tensor (PBFCT) features extracted from rs-fMRI in whitematter, in addition to the traditionalFCfeatures from gray matter, to develop a novel multi-class ASD diagnosis method in this work. Our method has two stages. Specifically, in the first stage of multi-source domain adaptation (MSDA), the source subjects belonging to multiple clinical centers (thus called as source domains) are all transformed into the same target feature space. Thus each subject in the target domain can be linearly reconstructed by the transformed subjects. In the second stage of multi-view sparse representation (MVSR), a multi-view classifier for multi-class ASD diagnosis is developed by jointly using both views of the FC and PBFCT features. The experimental results using the ABIDE dataset verify the effectiveness of ourmethod, which is capable of accurately classifying each subject into a respective ASD sub-category.
AB - The resting-state functional magnetic resonance imaging (rs-fMRI) reflects functional activity of brain regions by blood-oxygen-level dependent (BOLD) signals. Up to now, many computer-aided diagnosismethods based on rs-fMRI have been developed for Autism Spectrum Disorder (ASD). These methods are mostly the binary classification approaches to determine whether a subject is anASD patient or not. However, the disease often consists of several sub-categories, which are complex and thus still confusing to many automatic classification methods. Besides, existing methods usually focus on the functional connectivity (FC) features in greymatter regions,which only account for a small portion of the rs-fMRI data. Recently, the possibility to reveal the connectivity information in the white matter regions of rs-fMRI has drawn high attention. To this end, we propose to use the patch-based functional correlation tensor (PBFCT) features extracted from rs-fMRI in whitematter, in addition to the traditionalFCfeatures from gray matter, to develop a novel multi-class ASD diagnosis method in this work. Our method has two stages. Specifically, in the first stage of multi-source domain adaptation (MSDA), the source subjects belonging to multiple clinical centers (thus called as source domains) are all transformed into the same target feature space. Thus each subject in the target domain can be linearly reconstructed by the transformed subjects. In the second stage of multi-view sparse representation (MVSR), a multi-view classifier for multi-class ASD diagnosis is developed by jointly using both views of the FC and PBFCT features. The experimental results using the ABIDE dataset verify the effectiveness of ourmethod, which is capable of accurately classifying each subject into a respective ASD sub-category.
KW - Autism spectrum disorder
KW - Domain adaptation
KW - Functional correlation tensor
KW - Sparse representation
UR - http://www.scopus.com/inward/record.url?scp=85092680070&partnerID=8YFLogxK
U2 - 10.1109/TMI.2020.2987817
DO - 10.1109/TMI.2020.2987817
M3 - Article
C2 - 32305905
AN - SCOPUS:85092680070
SN - 0278-0062
VL - 39
SP - 3137
EP - 3147
JO - IEEE Transactions on Medical Imaging
JF - IEEE Transactions on Medical Imaging
IS - 10
M1 - 9067035
ER -