TY - GEN
T1 - Temporally dynamic resting-state functional connectivity networks for early MCI identification
AU - Wee, Chong Yaw
AU - Yang, Sen
AU - Yap, Pew Thian
AU - Shen, Dinggang
N1 - Copyright:
Copyright 2014 Elsevier B.V., All rights reserved.
PY - 2013
Y1 - 2013
N2 - Resting-state functional Magnetic Resonance Imaging (R-fMRI) scan provides a rich characterization of the dynamic changes or temporal variabilities caused by neural interactions that may happen within the scan duration. Multiple functional connectivity networks can be estimated from R-fMRI time series to effectively capture subtle yet short neural connectivity changes induced by disease pathologies. To effectively extract the temporally dynamic information, we utilize a sliding window approach to generate multiple shorter, yet overlapping sub-series from a full R-fMRI time series. Whole-brain sliding window correlations are computed based on these sub-series to generate a series of temporal networks, characterize the neural interactions between brain regions at different time scales. Individual estimation of these temporal networks overlooks the intrinsic temporal smoothness between successive overlapping R-fMRI sub-series. To handle this problem, we suggest to jointly estimate temporal networks by maximizing a penalized log likelihood via a fused lasso regularization: 1) l1-norm penalty ensures a sparse solution; 2) fused regularization preserves the temporal smoothness while allows correlation variability. The estimated temporal networks were applied for early Mild Cognitive Impairment (eMCI) identification, and our results demonstrate the importance of including temporally dynamic R-fMRI scan information for accurate diagnosis of eMCI.
AB - Resting-state functional Magnetic Resonance Imaging (R-fMRI) scan provides a rich characterization of the dynamic changes or temporal variabilities caused by neural interactions that may happen within the scan duration. Multiple functional connectivity networks can be estimated from R-fMRI time series to effectively capture subtle yet short neural connectivity changes induced by disease pathologies. To effectively extract the temporally dynamic information, we utilize a sliding window approach to generate multiple shorter, yet overlapping sub-series from a full R-fMRI time series. Whole-brain sliding window correlations are computed based on these sub-series to generate a series of temporal networks, characterize the neural interactions between brain regions at different time scales. Individual estimation of these temporal networks overlooks the intrinsic temporal smoothness between successive overlapping R-fMRI sub-series. To handle this problem, we suggest to jointly estimate temporal networks by maximizing a penalized log likelihood via a fused lasso regularization: 1) l1-norm penalty ensures a sparse solution; 2) fused regularization preserves the temporal smoothness while allows correlation variability. The estimated temporal networks were applied for early Mild Cognitive Impairment (eMCI) identification, and our results demonstrate the importance of including temporally dynamic R-fMRI scan information for accurate diagnosis of eMCI.
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U2 - 10.1007/978-3-319-02267-3_18
DO - 10.1007/978-3-319-02267-3_18
M3 - Conference contribution
AN - SCOPUS:84886736278
SN - 9783319022666
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 139
EP - 146
BT - Machine Learning in Medical Imaging - 4th International Workshop, MLMI 2013, Held in Conjunction with MICCAI 2013, Proceedings
PB - Springer Verlag
T2 - 4th International Workshop on Machine Learning in Medical Imaging, MLMI 2013, Held in Conjunction with 16th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2013
Y2 - 22 September 2013 through 22 September 2013
ER -