Tensorial spherical polar fourier diffusion mri with optimal dictionary learning

Jian Cheng, Dinggang Shen, Pew Thian Yap, Peter J. Basser

    Research output: Chapter in Book/Report/Conference proceedingChapter

    9 Citations (Scopus)

    Abstract

    High Angular Resolution Diffusion Imaging (HARDI) can characterize complex white matter micro-structure, avoiding the Gaussian diffusion assumption inherent in Diffusion Tensor Imaging (DTI). However, HARDI methods normally require significantly more signal measurements and a longer scan time than DTI, which limits its clinical utility. By considering sparsity of the diffusion signal, Compressed Sensing (CS) allows robust signal reconstruction from relatively fewer samples, reducing the scanning time. A good dictionary that sparsifies the signal is crucial for CS reconstruction. In this paper, we propose a novel method called Tensorial Spherical Polar Fourier Imaging (TSPFI) to recover continuous diffusion signal and diffusion propagator by representing the diffusion signal using an orthonormal TSPF basis. TSPFI is a generalization of the existing model-based method DTI and the model-free method SPFI. We also propose dictionary learning TSPFI (DL-TSPFI) to learn an even sparser dictionary represented as a linear combination of TSPF basis from continuous mixture of Gaussian signals. The learning process is efficiently performed in a small sub-space of SPF coefficients, and the learned dictionary is proved to be sparse for all mixture of Gaussian signals by adaptively setting the tensor in TSPF basis. Then the learned DL-TSPF dictionary is optimally and adaptively applied to different voxels using DTI and a weighted LASSO for CS reconstruction. DL-TSPFI is a generalization of DL-SPFI, by considering general adaptive tensor setting instead of a scale value. The experiments demonstrated that the learned DL-TSPF dictionary has a sparser representation and lower reconstruction Root-Mean-Squared-Error (RMSE) than both the original SPF basis and the DL-SPF dictionary.

    Original languageEnglish
    Title of host publicationLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
    PublisherSpringer Verlag
    Pages174-182
    Number of pages9
    DOIs
    Publication statusPublished - 2015 Oct 1

    Publication series

    NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
    Volume9349
    ISSN (Print)0302-9743
    ISSN (Electronic)1611-3349

    Bibliographical note

    Publisher Copyright:
    © Springer International Publishing Switzerland 2015.

    ASJC Scopus subject areas

    • Theoretical Computer Science
    • General Computer Science

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