The complete plastome sequence from the family Malpighiaceae, Bunchosia argentea (Jacq.) DC

Sangjin Jo; Young Kee Kim; Se Hwan Cheon; Ki Joong Kim

doi:10.1080/23802359.2019.1584065

The complete plastome sequence from the family Malpighiaceae, Bunchosia argentea (Jacq.) DC

Sangjin Jo, Young Kee Kim, Se Hwan Cheon, Ki Joong Kim

Department of Life Sciences

Research output: Contribution to journal › Article › peer-review

1 Citation (Scopus)

Abstract

In this study, we determined the complete plastome sequence of Bunchosia argentea (Jacq.) DC. (Malpighiaceae) (NCBI acc. no. MK390344). The gene order and the structure of the B. argentea plastome are collinear with those of the typical plastomes of land plants. The complete plastome size is 158,741 bp in length and consists of a large single-copy region of 88,345 bp and a small single-copy region of 16,816 bp, which are separated by a pair of 26,790 bp-long inverted repeat regions. The overall A-T content of the plastome sequence is 63.5%. The plastome contains 110 genes, of which 76 are protein-coding genes, 30 are tRNA genes, and four are rRNA genes. The rpl32 was lost and two genes (infA and rps7) were pseudogenized. Sixteen genes contain one intron and two genes have two introns. A total of 87 simple sequence repeat loci were identified within the genome. Phylogenetic analysis revealed that B. argentea and two Byrsonima species formed a clade with 100% bootstrap support.

Original language	English
Pages (from-to)	1027-1029
Number of pages	3
Journal	Mitochondrial DNA Part B: Resources
Volume	4
Issue number	1
DOIs	https://doi.org/10.1080/23802359.2019.1584065
Publication status	Published - 2019 Jan 2

Keywords

Bunchosia argentea
Malpighiaceae
Malpighiales
Plastome
tropical fruit

ASJC Scopus subject areas

Molecular Biology
Genetics

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10.1080/23802359.2019.1584065

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abstract = "In this study, we determined the complete plastome sequence of Bunchosia argentea (Jacq.) DC. (Malpighiaceae) (NCBI acc. no. MK390344). The gene order and the structure of the B. argentea plastome are collinear with those of the typical plastomes of land plants. The complete plastome size is 158,741 bp in length and consists of a large single-copy region of 88,345 bp and a small single-copy region of 16,816 bp, which are separated by a pair of 26,790 bp-long inverted repeat regions. The overall A-T content of the plastome sequence is 63.5%. The plastome contains 110 genes, of which 76 are protein-coding genes, 30 are tRNA genes, and four are rRNA genes. The rpl32 was lost and two genes (infA and rps7) were pseudogenized. Sixteen genes contain one intron and two genes have two introns. A total of 87 simple sequence repeat loci were identified within the genome. Phylogenetic analysis revealed that B. argentea and two Byrsonima species formed a clade with 100% bootstrap support.",

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The complete plastome sequence from the family Malpighiaceae, Bunchosia argentea (Jacq.) DC

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