The complete plastome sequences of Mangifera indica L. (Anacardiaceae)

Sangjin Jo, Hoe Won Kim, Young Kee Kim, Jung Yeon Sohn, Se Hwan Cheon, Ki Joong Kim

    Research output: Contribution to journalArticlepeer-review

    7 Citations (Scopus)

    Abstract

    In this study, we determined the complete plastome sequence of Mangifera indica L. (Anacardiaceae) (NCBI acc. no. KX871231). The complete plastome is 157,780 bp in length, and consists of a large single copy of 86,673 bp and a small single copy of 18,349 bp, separated by two inverted repeats of 25,792 bp. The plastome contains 112 genes, of which 78 are protein-coding genes, 30 are tRNA genes, and four are rRNA genes. Sixteen genes contain one intron and two genes have two introns. The average A-T content of the plastome is 62.1%. The M. indica plastome has approximately 15 kb inversion between trnT-UGU and trnT-GGU. We identify a palindromic repeat of 18 bp (ATTCTTTTTTTTTTTTTT/AAAAAAAAAAAAAAGAAT) near the inversion breakpoints of M. indica plastome. Phylogenetic analysis revealed that M. indica is a sister group of Rhus chinensis with 100% bootstrap support. Anacardiaceae clade is a sister group of Boswellia sacra (Burseraceae) with 100% bootstrap support.

    Original languageEnglish
    Pages (from-to)698-700
    Number of pages3
    JournalMitochondrial DNA Part B: Resources
    Volume2
    Issue number2
    DOIs
    Publication statusPublished - 2017 Dec 20

    Bibliographical note

    Funding Information:
    This work was supported by the National Research Foundation of Korea (NRF) under the Grant Nos. NRF-2015M3A9B8030588 and NRF-2015M3A9B8047398 to KJK.

    Publisher Copyright:
    © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

    Keywords

    • Anacardiaceae
    • Mangifera indica
    • Plastome
    • large inversion
    • mango

    ASJC Scopus subject areas

    • Molecular Biology
    • Genetics

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